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authorMichael Larabel <michael@phx-laptop.(none)>2008-10-03 15:12:06 -0400
committerMichael Larabel <michael@phx-laptop.(none)>2008-10-03 15:12:06 -0400
commitfaa872d624096ca4e2ee91727a1a6d83263a80a7 (patch)
tree6201b22e8b2124dccd0a590bc7a8be25da5c85c2 /pts/test-resources/mafft
parent24d2198e40bf2f2543e4b7136d2a27cfdf77f14b (diff)
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pts: Move over all relevent tests to using the new universal micro-timer
functionality
Diffstat (limited to 'pts/test-resources/mafft')
-rwxr-xr-xpts/test-resources/mafft/install.sh6
-rw-r--r--pts/test-resources/mafft/parse-results.php4
2 files changed, 4 insertions, 6 deletions
diff --git a/pts/test-resources/mafft/install.sh b/pts/test-resources/mafft/install.sh
index 79ecb4a..2cb20d8 100755
--- a/pts/test-resources/mafft/install.sh
+++ b/pts/test-resources/mafft/install.sh
@@ -27,6 +27,8 @@ chmod +x align
cat>mafft<<EOT
#!/bin/sh
-/usr/bin/time -f "Sequence Alignment Time: %e Seconds" ./align 2>&1 | grep Seconds
+\$TIMER_START
+./align 2>&1
+\$TIMER_STOP
EOT
-chmod +x mafft \ No newline at end of file
+chmod +x mafft
diff --git a/pts/test-resources/mafft/parse-results.php b/pts/test-resources/mafft/parse-results.php
deleted file mode 100644
index 84f126b..0000000
--- a/pts/test-resources/mafft/parse-results.php
+++ /dev/null
@@ -1,4 +0,0 @@
-<?php
-$BENCHMARK_RESULTS = substr($argv[1], strrpos($argv[1], "Sequence Alignment Time:") + 25);
-echo trim(substr($BENCHMARK_RESULTS, 0, strpos($BENCHMARK_RESULTS, "Seconds")));
-?>