Renaming everying everest to genome

16 files changed, 1133 insertions, 0 deletions

diff --git a/genomed/LICENSE b/genomed/LICENSE
new file mode 100644
index 0000000..8764452
--- /dev/null
+++ b/genomed/LICENSE
@@ -0,0 +1,305 @@
+            GNU GENERAL PUBLIC LICENSE
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diff --git a/genomed/Makefile b/genomed/Makefile
new file mode 100644
index 0000000..acc024f
--- /dev/null
+++ b/genomed/Makefile
@@ -0,0 +1,35 @@
+NAME 		:= genomed
+SPECFILE	= extra/$(NAME).spec
+VERSION         := $(shell rpm -q --qf "%{VERSION}\n" --specfile $(SPECFILE)| head -1)
+RELEASE         := $(shell rpm -q --qf "%{RELEASE}\n" --specfile $(SPECFILE)| head -1)
+UPSTREAM_NAME   = $(PROJECT)
+
+TAG             = $(subst .,_,$(NAME)-$(VERSION)-$(RELEASE))
+
+CVS             = cvs
+RPMBUILD	= rpmbuild
+INSTALL         = /usr/bin/install
+INSTALL_DIR     = $(INSTALL) --verbose -d -m 755
+
+RPM_TOPDIR	= /tmp/$(NAME)-$(VERSION)-$(RELEASE)-build
+_RPM_OPTS	= --define "_topdir	    $(RPM_TOPDIR)" \
+		  --define "_builddir	    %{_topdir}" \
+		  --define "_sourcedir	    $(shell pwd)/pkg" \
+		  --define "_specdir	    $(shell pwd)" \
+		  --define "_rpmdir	    $(shell pwd)" \
+		  --define "_srcrpmdir 	    $(shell pwd)" \
+		  --define '_rpmfilename    %%{NAME}-%%{VERSION}-%%{RELEASE}.%%{ARCH}.rpm'
+RPM_OPTS        = $(strip $(_RPM_OPTS))
+
+rpm: clean gem $(RPM_TOPDIR) $(SPECFILE)
+	$(RPMBUILD) --clean $(RPM_OPTS) -bb $(SPECFILE)
+
+gem: 
+	rake package
+
+clean:
+	@rm -rfv *~ *.rpm $(RPM_TOPDIR) $(ARCHIVE)
+	rake clobber_package
+
+$(RPM_TOPDIR):
+	@$(INSTALL_DIR) $@
diff --git a/genomed/README b/genomed/README
new file mode 100644
index 0000000..bf389c3
--- /dev/null
+++ b/genomed/README
@@ -0,0 +1,4 @@
+genomed
+============
+
+A gem that provides...
diff --git a/genomed/Rakefile b/genomed/Rakefile
new file mode 100644
index 0000000..eca48ec
--- /dev/null
+++ b/genomed/Rakefile
@@ -0,0 +1,46 @@
+require 'rubygems'
+require 'rake/gempackagetask'
+require 'rake/clean'
+require 'rubygems/specification'
+require 'date'
+
+GEM = "genomed"
+GEM_VERSION = "1.0.0"
+AUTHOR = "Red Hat IT"
+EMAIL = "genome-project-list@redhat.com"
+HOMEPAGE = "http://fedorahosted.org/genome"
+SUMMARY = "A gem that installs the genomed daemon and service script.  The service runs on port 8106 by default"
+
+spec = Gem::Specification.new do |s|
+  s.name = GEM
+  s.version = GEM_VERSION
+  s.platform = Gem::Platform::RUBY
+  s.has_rdoc = true
+  s.extra_rdoc_files = ["README", "LICENSE"]
+  s.executables = ["genomed", "genomed-ctl"]
+  s.summary = SUMMARY
+  s.description = s.summary
+  s.author = AUTHOR
+  s.email = EMAIL
+  s.homepage = HOMEPAGE
+  s.add_dependency "picnic"
+  s.require_path = 'lib'
+  s.autorequire = GEM
+  s.files = %w(LICENSE README Rakefile) + Dir.glob("{bin,extra,lib,specs}/**/*")
+end
+
+Rake::GemPackageTask.new(spec) do |pkg|
+  pkg.gem_spec = spec
+end
+
+desc "install the gem locally"
+task :install => [:package] do
+  sh %{sudo gem install pkg/#{GEM}-#{GEM_VERSION}}
+end
+
+desc "create a gemspec file"
+task :make_spec do
+  File.open("#{GEM}.gemspec", "w") do |file|
+    file.puts spec.to_ruby
+  end
+end
diff --git a/genomed/bin/genomed b/genomed/bin/genomed
new file mode 100644
index 0000000..3736b83
--- /dev/null
+++ b/genomed/bin/genomed
@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+#
+#  Created by Brenton Leanhardt on 2008-4-9.
+#  Copyright (c) 2008. All rights reserved.
+
+require 'rubygems'
+require 'picnic/cli'
+
+cli = Picnic::Cli.new(
+    'genomed',
+    :app_path => File.expand_path(File.dirname(File.expand_path(__FILE__)))
+)
+
+cli.handle_cli_input
diff --git a/genomed/bin/genomed-ctl b/genomed/bin/genomed-ctl
new file mode 100644
index 0000000..a62d0b6
--- /dev/null
+++ b/genomed/bin/genomed-ctl
@@ -0,0 +1,8 @@
+#!/usr/bin/env ruby
+
+require 'rubygems'
+require 'picnic/service_control'
+
+ctl = Picnic::ServiceControl.new('genomed')
+
+ctl.handle_cli_input
diff --git a/genomed/extra/config.yml b/genomed/extra/config.yml
new file mode 100644
index 0000000..9d91e46
--- /dev/null
+++ b/genomed/extra/config.yml
@@ -0,0 +1,88 @@
+# AN IMPORTANT NOTE ABOUT YAML CONFIGURATION FILES:
+# !!! Be sure to use spaces instead of tabs for indentation, as YAML is very
+# !!! sensitive to white-space inconsistencies!
+
+##### HTTP SERVER #####################################################################
+
+# Under what HTTP environment are you running the Cloudmasterd server? The following methods
+# are currently supported:
+#
+# webrick -- simple stand-alone HTTP server; this is the default method
+# mongrel -- fast stand-alone HTTP server; much faster than webrick, but 
+#            you'll have to first install the mongrel gem
+# 
+
+### webrick example
+
+server: webrick
+port: 8106
+
+### webrick SSL example
+
+#server: webrick
+#port: 443
+#ssl_cert: /path/to/your/ssl.pem
+
+# if the private key is separate from cert:
+#ssl_key: /path/to/your/private_key.pem
+
+
+### mongrel example
+
+#server: mongrel
+#port: 8106
+
+# It is possible to run mongrel over SSL, but you will need to use a reverse proxy
+# (try Pound or Apache).
+
+
+##### DATABASE ########################################################################
+
+# The Blog needs a database to store its records.
+# 
+# By default, we use MySQL, since it is widely used and does not require any additional
+# ruby libraries besides ActiveRecord.
+#
+# With MySQL, your config would be something like the following:
+# (be sure to create the blog database in MySQL beforehand,
+#   i.e. `mysqladmin -u root create blog`)
+
+#database:
+#  adapter: mysql
+#  database: blog
+#  username: root
+#  password: 
+#  host: localhost
+
+
+# Instead of MySQL you can use SQLite3, PostgreSQL, MSSQL, or anything else supported 
+# by ActiveRecord.
+#
+# If you do not have a database server available, you can try using the SQLite3
+# back-end. SQLite3 does not require it's own server. Instead all data is stored
+# in local files. For SQLite3, your configuration would look something like the
+# following (don't forget to install the 'sqlite3-ruby' gem first!):
+#
+#database:
+#  adapter: sqlite3
+#  dbfile: /var/lib/blog.db
+
+##### GENOMED ########################################################################
+
+
+##### LOGGING #########################################################################
+
+# This log is where you'll want to look in case of problems. 
+# 
+# By default, we will try to create a log file named 'blog.log' in the current 
+# directory (the directory where you're running the blog from). A better place to put 
+# the log is in /var/log, but you will have to run blog as root or otherwise give 
+# it permissions.
+# 
+# Set the level to DEBUG if you want more detailed logging. Other options are
+# INFO, WARN, and ERROR (DEBUG is most verbose, ERROR is least).
+
+log:
+  level: DEBUG
+  file: /var/log/genomed.log
+#  level: INFO
diff --git a/genomed/extra/genomed.apache b/genomed/extra/genomed.apache
new file mode 100644
index 0000000..deaee88
--- /dev/null
+++ b/genomed/extra/genomed.apache
@@ -0,0 +1,5 @@
+RewriteEngine On
+RewriteRule ^/genome$ http://%{SERVER_NAME}/genome/nodes.html [NE]
+
+ProxyPass /genome http://localhost:8106
+ProxyPassReverse /genome http://localhost:8106
diff --git a/genomed/extra/genomed.redhat b/genomed/extra/genomed.redhat
new file mode 100755
index 0000000..0b4fd29
--- /dev/null
+++ b/genomed/extra/genomed.redhat
@@ -0,0 +1,43 @@
+#!/bin/bash
+#
+# genomed:        Init script for Genome daemon.
+#
+# chkconfig: 35 91 03 
+#
+# description:     Web service for Genome repositories.
+#
+#                   
+#
+
+# Source function library.
+. /etc/init.d/functions
+
+CTL=genomed-ctl
+
+[ -z "$HOME" ] && export HOME=/
+
+case "$1" in
+    start)
+	echo -n $"Starting genomed: "
+        $CTL start
+        RETVAL=$?
+        ;;
+    stop)
+	echo -n $"Stopping genomed: "
+        $CTL stop
+	RETVAL=$?
+        ;;
+    restart)
+	$0 stop
+	$0 start
+        ;;
+    status)
+        $CTL status
+	RETVAL=$?
+        ;;
+ *)
+   echo $"Usage: $0 {start|stop|status|restart}"
+   RETVAL=1
+esac
+
+exit $RETVAL
diff --git a/genomed/extra/genomed.spec b/genomed/extra/genomed.spec
new file mode 100644
index 0000000..b6b4183
--- /dev/null
+++ b/genomed/extra/genomed.spec
@@ -0,0 +1,70 @@
+# Generated from genomed-0.1.0.gem by gem2rpm -*- rpm-spec -*-
+%define ruby_sitelib %(ruby -rrbconfig -e "puts Config::CONFIG['sitelibdir']")
+%define gemdir %(ruby -rubygems -e 'puts Gem::dir' 2>/dev/null)
+%define gemname genomed
+%define geminstdir %{gemdir}/gems/%{gemname}-%{version}
+
+Summary: Genome Repository daemon for machine configuration
+Name: rubygem-%{gemname}
+Version: 1.0.0
+Release: 6%{?dist}
+Group: Applications/System
+License: GPLv2+
+URL: http://fedorahosted.org/genome
+Source0: %{gemname}-%{version}.gem
+BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
+Requires: httpd
+Requires: rubygems
+Requires: rubygem(picnic) 
+Requires: rubygem(activesupport) 
+Requires: rubygem(reststop) >= 0.2.1
+Requires: rubygem(genome-dsl)
+Requires: genome-styling
+BuildRequires: rubygems
+BuildArch: noarch
+Provides: rubygem(%{gemname}) = %{version}
+
+%description
+Genome Repository daemon for machine configuration
+
+%prep
+
+%build
+
+%install
+rm -rf %{buildroot}
+mkdir -p %{buildroot}%{gemdir} %{buildroot}/etc/init.d %{buildroot}/etc/genomed
+gem install --local --install-dir %{buildroot}%{gemdir} \
+            --force --rdoc %{SOURCE0}
+mkdir -p %{buildroot}/%{_bindir}
+mv %{buildroot}%{gemdir}/bin/* %{buildroot}/%{_bindir}
+mv %{buildroot}%{geminstdir}/extra/genomed.redhat %{buildroot}/etc/init.d/genomed
+mv %{buildroot}%{geminstdir}/extra/config.yml %{buildroot}/etc/genomed/config.yml
+rmdir %{buildroot}%{gemdir}/bin
+find %{buildroot}%{geminstdir}/bin -type f | xargs chmod a+x
+
+# Put in the apache rules
+mkdir -p %{buildroot}/etc/httpd/conf.d
+mv %{buildroot}%{geminstdir}/extra/genomed.apache %{buildroot}/etc/httpd/conf.d/genomed.conf
+
+%clean
+rm -rf %{buildroot}
+
+%files
+%{_bindir}/genomed
+%{_bindir}/genomed-ctl
+%{gemdir}/gems/%{gemname}-%{version}/
+%doc %{gemdir}/doc/%{gemname}-%{version}
+%doc %{geminstdir}/LICENSE
+%doc %{geminstdir}/README
+%{gemdir}/cache/%{gemname}-%{version}.gem
+%{gemdir}/specifications/%{gemname}-%{version}.gemspec
+%config /etc/genomed/config.yml
+/etc/httpd/conf.d/genomed.conf
+
+%defattr(755, root, root, -)
+/etc/init.d/genomed
+
+%changelog
+* Mon Jun 23 2008  <bleanhar@redhat.com> - 1.0.0-1
+- 1.0 Release
diff --git a/genomed/lib/genomed.rb b/genomed/lib/genomed.rb
new file mode 100644
index 0000000..3a1705e
--- /dev/null
+++ b/genomed/lib/genomed.rb
@@ -0,0 +1,433 @@
+# Copyright (C) 2008 Red Hat, Inc
+
+# This program is free software; you can redistribute it and/or
+# modify it under the terms of the GNU General Public License
+# as published by the Free Software Foundation; either version 2
+# of the License, or (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# You should have received a copy of the GNU General Public License
+# a long with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
+
+$: << File.dirname(File.expand_path(__FILE__))
+
+gem 'reststop', '~> 0.2'
+
+require 'yaml'
+require 'fileutils'
+require 'rubygems'
+require 'picnic'
+require 'reststop'
+require 'genome-dsl'
+require 'restr'
+require 'cgi'
+require 'xmlrpc/client'
+require 'pp'
+
+CONTEXT="/genome"
+
+Camping.goes :Genomed
+Genomed.picnic!
+
+module Genomed::Controllers
+  class Systems < REST 'systems'
+    # OMG, this is ugly
+    def _get_cobbler_installed_systems
+      systems = {}
+      `cat /var/log/cobbler/install.log | cut -f2-3`.each do |line| 
+        name, ip = line.split("\t") 
+        ip.chomp!
+        name.chomp!
+        hostname = _get_host_name(ip).chomp 
+        puts "name: #{name}, ip: #{ip}, hostname: #{hostname}"
+
+        systems[name] = {"ip" => ip, "hostname" => hostname}
+      end
+      return systems
+    end
+
+    def _get_host_name(ip)
+      lookup = `nslookup #{ip} | grep name | cut -f2`
+      unless lookup.empty?
+        return lookup.split("=")[1].strip.split(".").join(".")
+      end
+    end
+
+    def read(name)
+      name = CGI::unescape(name)
+      @systems = _get_cobbler_installed_systems
+      @system = {}
+      if @systems.has_key?(name)
+        @system = {"name" => name, "ip" => @systems[name]["ip"], "hostname" => @systems[name]["hostname"]}
+      end
+      render :view_system
+    end
+
+    def list
+      @systems = _get_cobbler_installed_systems
+      pp @systems
+      render :list_systems
+    end
+  end
+
+  class MachineTypes < REST 'machine_types'
+    include GenomeDsl
+
+    # GET /types/foo
+    # GET /types/foo.xml
+    def read(type)
+      @machine = machines.find {|m| m.name == type}
+      render :view_type
+    end
+
+    # GET /types
+    # GET /types.xml
+    def list
+      @machines = machines
+      render :list_types
+    end
+  end
+
+  class Nodes < REST 'nodes'
+    # GET /nodes/foo
+    # GET /nodes/foo.xml
+    def read(name)
+      @name = name
+      begin
+        @info = YAML.load(File.read("/etc/genome/nodes/#{@name}/node.yaml")) 
+        render :view_node
+      rescue
+        # node doesn't exist yet
+        render :add
+      end
+    end
+
+    # GET /nodes
+    # GET /nodes.xml
+    def list
+      @nodes = Dir["/etc/genome/nodes/*"].map { |m| File.basename(m) }
+      render :list_nodes
+    end
+
+    def create
+      if input.wizard
+        puts "You're using the wizard!"   
+        puts input.inspect
+      elsif input.yaml
+        node_dir = "/etc/genome/nodes/#{input.node_name}"
+        persist_node(input.node_name, input.yaml)
+      elsif input.xml
+        xml = XmlSimple.xml_in(input.xml)
+
+        params = Hash.new
+        xml["parameters"].each do |p| 
+          p.each_key do |k|
+            params[k] = p[k].to_s #The value is an array. Yay.
+          end
+        end
+
+        persist_node(xml["name"].to_s, YAML.dump({"classes" => xml["class"], "parameters" => params}))
+      end
+
+      redirect R(Nodes) if @format == :HTML 
+    end
+
+    def persist_node(node, yaml)
+      node_dir = "/etc/genome/nodes/#{node}"
+      FileUtils.mkdir_p(node_dir) unless File.exist?(node_dir)
+      File.open(node_dir + "/node.yaml", "w") {|f| f.puts yaml}
+    end
+  end
+
+  class Wizard < REST 'wizard'
+    include GenomeDsl
+
+    # GET /wizard/foo
+    # GET /wizard/foo.xml
+    def read(type)
+      @machine = machines.find {|m| m.name == type}
+      render :view_type
+    end
+
+    # GET /types
+    # GET /types.xml
+    def list
+      @machines = machines
+      render :list_types
+    end
+
+    def create
+      @machine_type = input.machine_type
+
+      redirect CONTEXT + R(Nodes)
+    end
+  end
+end
+
+module Genomed::Views
+  def initialize(*args)
+    super(*args)
+    @x = Builder::XmlMarkup.new(:indent => 1)
+  end
+
+  module HTML
+    def layout
+      html do
+        head do
+          title 'Genome'
+          link :rel => 'stylesheet', :type => 'text/css', :href => '/styles.css', :media => 'screen'
+        end
+        body do
+          div.header! do
+            div.headerLogo! {}
+          end
+          div.content! do
+            h1 do
+              [a("Machine Types", :href => CONTEXT + R(Genomed::Controllers::MachineTypes)), 
+               a("Nodes", :href => CONTEXT + R(Genomed::Controllers::Nodes)),
+               a("Systems", :href => CONTEXT + R(Genomed::Controllers::Systems))].join " | "
+            end
+            self << yield
+          end
+        end
+      end
+    end
+ 
+    def add
+      form(:method => 'post', :action => CONTEXT + R(Genomed::Controllers::Nodes)) do
+        h2 "YAML"
+ 
+        textarea :name => 'yaml', :rows => '25', :cols => '100'; br
+
+        input :name => 'node_name', :value => @name
+        input :type => 'submit', :value => "Submit"
+      end
+    end
+
+    def view_type
+      p do
+        h1 @machine.name
+        p @machine.desc
+
+        form(:method => 'post', :action => CONTEXT + R(Genomed::Controllers::Nodes)) do
+          h2 "Fully qualified domain name"
+          input :name => "fqdn", :type => 'text', :size  => 45,
+                :value => "[prefix]-#{@machine.name}.usersys.redhat.com"
+
+          h2 "Classes"
+          @machine.classes.each_with_index do |c, i|
+            input :name => "class#{i}", :type => 'text', 
+                  :value => c; br
+          end
+  
+          h2 "Parameters"
+          fieldset do
+            @machine.facts.each do |f|
+              a(f.name, :href => "fix me", :title => f.desc); br
+              input :name => "param_" + f.name, :type => 'text', :size => 45, 
+                    :value => f.default; br
+            end
+          end
+
+          input :type => 'hidden', :name => 'node_name', :value => @name
+          input :type => 'hidden', :name => 'wizard', :value => true
+          input :type => 'submit', :value => "Submit"
+        end
+      end
+    end 
+
+    def view_node
+      h1 @name
+    
+      p "This form allows you to submit the YAML to be used by the Puppetmaster to " +
+        "determine the configuration to be compiled for a particular host."
+      form(:method => 'post', :action => CONTEXT + R(Genomed::Controllers::Nodes)) do
+ 
+        textarea ::YAML.dump(@info), :name => 'yaml', :rows => '25', :cols => '100'; br
+
+        input :type => 'hidden', :name => 'node_name', :value => @name
+        input :type => 'submit', :value => "Submit"
+      end
+    end
+
+    def view_system
+      h1 @system["name"]
+
+      p do
+        "IP Address: #{@system["ip"]} "
+      end
+      p do 
+        "Hostname: #{@system["hostname"]}"
+      end
+    end
+
+    def list_nodes
+      h1 "Nodes:"
+      p "To create a new node just browse to the page corresponding to the hostname.  " +
+        "eg, #{CONTEXT + R(Genomed::Controllers::Nodes, "[hostname]")}."
+      p do
+        ol do
+          @nodes.each do |n| 
+            # BUG: default format is not getting preserved
+            @format = :HTML
+            li {a(n, :href => CONTEXT + R(Genomed::Controllers::Nodes, n))}
+          end
+        end
+      end
+    end
+
+    def list_types
+      p do
+        p "Click the links to create a new instance of a particular machine type."
+        ol do
+          @machines.each do |m|
+            li do 
+              #h1 {a(m.name, :href => R(Genomed::Controllers::MachineTypes, m.name))}
+              h1 m.name
+              p(m.desc)
+            end
+          end
+        end
+      end
+    end
+
+    def list_systems
+      host = ENV["HOSTNAME"]
+      cobbler_web = "http://#{host}/cobbler/web"
+      h1 "Systems:"
+      h4 do
+        text("This information is gathered from the /var/log/cobbler/install.log file.\n")
+        text("If you don't see what you're looking for, try ")
+        a("cobbler web", :href => "#{cobbler_web}/?mode=system_list")
+      end
+         
+      p do
+        ol do
+          @systems.each_key do |name|
+            li do 
+              a(name, :href => URL("http://#{host}/#{CONTEXT}/systems/?id=#{name}"))
+              text(" (")
+              a("edit in cobbler", :href => "#{cobbler_web}/?mode=system_edit&name=#{name}")
+              text(")")
+              ul do
+                li "ip: #{@systems[name]["ip"]}"
+                li "hostname: #{@systems[name]["hostname"]}"
+              end
+            end
+          end
+        end
+      end
+    end
+  end
+  default_format :HTML
+
+  module YAML
+    CONTENT_TYPE = 'text/plain'
+    
+    def layout
+      yield
+    end
+
+    # This should only be used for Puppet's external nodes
+    def view_node
+      ::YAML.dump(@info)
+    end
+
+    def view_system
+      ::YAML.dump(@system)
+    end
+
+    def list_systems
+      ::YAML.dump(@systems)
+    end
+  end
+
+  module XML
+    def layout
+      yield
+    end
+
+    def list_types
+      @x.instruct!
+      @x.machine_types {
+        @machines.each do |m|
+          @x.machine_type {
+            @x.name(m.name)
+            @x.description(m.desc)
+          }
+        end
+      }
+    end
+
+    def view_type
+      @x.instruct!
+      @x.machine {
+        @x.name(@machine.name)
+        @x.description(@machine.desc)
+        @machine.classes.each {|c| @x.class(c)}
+        @machine.facts.each {|f| 
+          @x.fact {
+            @x.name(f.name)
+            @x.description(f.desc)
+            @x.default(f.default)
+          }
+        }
+      }
+    end
+
+    def list_nodes
+      @x.instruct!
+      @x.nodes {
+        @nodes.each {|n| @x.node(n)}
+      }
+    end
+
+    def view_node
+      # There no reason we should only support params and classes.
+      # It might be nice to simply iterate over all the keys and 
+      # display their values.
+      @x.instruct!
+      @x.node {
+        @x.name(@name)
+        @info["parameters"].each_pair do |n,v| 
+          @x.parameters {
+            instance_eval("@x.#{n}(v)")
+          }
+        end
+        @info["classes"].each {|c| @x.class(c)}
+      } 
+    end
+
+    def list_systems
+      @x.instruct!
+      @x.systems {
+        @systems.each_key {|system| 
+          @x.system {
+            @x.name(system)
+            @x.ip(@systems[system]["ip"])
+            @x.hostname(@systems[system]["hostname"])
+          }
+        }
+      }
+    end
+
+    def view_system
+      @x.instruct!
+      @x.system {
+        @x.name(@system["name"])
+        @x.ip(@system["ip"])
+        @x.hostname(@system["hostname"])
+      }
+    end
+  end
+end
+
+# Required by picnic
+def Genomed.create; end
+
+Genomed.start_picnic
diff --git a/genomed/script/destroy b/genomed/script/destroy
new file mode 100755
index 0000000..40901a8
--- /dev/null
+++ b/genomed/script/destroy
@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+APP_ROOT = File.expand_path(File.join(File.dirname(__FILE__), '..'))
+
+begin
+  require 'rubigen'
+rescue LoadError
+  require 'rubygems'
+  require 'rubigen'
+end
+require 'rubigen/scripts/destroy'
+
+ARGV.shift if ['--help', '-h'].include?(ARGV[0])
+RubiGen::Base.use_component_sources! [:newgem_simple, :test_unit]
+RubiGen::Scripts::Destroy.new.run(ARGV)
diff --git a/genomed/script/generate b/genomed/script/generate
new file mode 100755
index 0000000..5c8ed01
--- /dev/null
+++ b/genomed/script/generate
@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+APP_ROOT = File.expand_path(File.join(File.dirname(__FILE__), '..'))
+
+begin
+  require 'rubigen'
+rescue LoadError
+  require 'rubygems'
+  require 'rubigen'
+end
+require 'rubigen/scripts/generate'
+
+ARGV.shift if ['--help', '-h'].include?(ARGV[0])
+RubiGen::Base.use_component_sources! [:newgem_simple, :test_unit]
+RubiGen::Scripts::Generate.new.run(ARGV)
diff --git a/genomed/spec/genomed_spec.rb b/genomed/spec/genomed_spec.rb
new file mode 100644
index 0000000..af38873
--- /dev/null
+++ b/genomed/spec/genomed_spec.rb
@@ -0,0 +1,27 @@
+# Copyright (C) 2008 Red Hat, Inc
+
+# This program is free software; you can redistribute it and/or
+# modify it under the terms of the GNU General Public License
+# as published by the Free Software Foundation; either version 2
+# of the License, or (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# You should have received a copy of the GNU General Public License
+# a long with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
+
+require File.dirname(__FILE__) + '/spec_helper.rb'
+
+# Time to add your specs!
+# http://rspec.info/
+describe "Place your specs here" do
+  
+  it "find this spec in spec directory" do
+    violated "Be sure to write your specs"
+  end
+  
+end
diff --git a/genomed/spec/spec.opts b/genomed/spec/spec.opts
new file mode 100644
index 0000000..cf6add7
--- /dev/null
+++ b/genomed/spec/spec.opts
@@ -0,0 +1 @@
+--colour
\ No newline at end of file
diff --git a/genomed/spec/spec_helper.rb b/genomed/spec/spec_helper.rb
new file mode 100644
index 0000000..9102400
--- /dev/null
+++ b/genomed/spec/spec_helper.rb
@@ -0,0 +1,26 @@
+# Copyright (C) 2008 Red Hat, Inc
+
+# This program is free software; you can redistribute it and/or
+# modify it under the terms of the GNU General Public License
+# as published by the Free Software Foundation; either version 2
+# of the License, or (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# You should have received a copy of the GNU General Public License
+# a long with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
+
+begin
+  require 'spec'
+rescue LoadError
+  require 'rubygems'
+  gem 'rspec'
+  require 'spec'
+end
+
+$:.unshift(File.dirname(__FILE__) + '/../lib')
+require 'genomed'